PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OCA

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.3	CDRLenMismatch	-1.0	H1	20	H1-20-*	-1	VASGRtfsvsgrTFSDHGLG
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.3	CDRLenMismatch	-1.0	H2	15	H2-15-*	-1	SISWSvdgdaTYYTD
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.3	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AAGlrggTYARTIYEYDY
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.3	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	9	GVNAKNTV	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.3	CDRLenMismatch	-1.0	H1	20	H1-20-*	-1	VASGRtfsvsgrTFSDHGLG
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.3	CDRLenMismatch	-1.0	H2	15	H2-15-*	-1	SISWSvdgdaTYYTD
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.3	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AAGlrggTYARTIYEYDY
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.3	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	12	GVNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022