PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OBZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-61*08	90.4	Hu_IGHV4-61*08	60.0	H1	15	H1-15-2	13	SVSGVSVTSdiYYWT	BBBLBBAABAABBBB
A	heavy	Homo.sapiens	Hu_IGHV4-61*08	90.4	Hu_IGHV4-61*08	66.7	H2	9	H2-9-1	12	YIFYNGDTN	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV4-61*08	90.4	Hu_IGHV4-61*08	100.0	H3	18	H3-18-*	-1	ARGTEDlgycSSGSCPNH
A	heavy	Homo.sapiens	Hu_IGHV4-61*08	90.4	Hu_IGHV4-61*08	75.0	H4	8	H4-8-1	13	IDTSKNEF	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	91.3	Hu_IGKV1-39*01	63.6	L1	11	L1-11-1	9	RPSQNIRSFLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	91.3	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	5	YAASNLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	91.3	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	8	QQSYNTPPT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	91.3	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	11	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	90.4	Hu_IGHV4-61*08	60.0	H1	15	H1-15-2	12	SVSGVSVTSdiYYWT	BBBLBBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	90.4	Hu_IGHV4-61*08	66.7	H2	9	H2-9-1	12	YIFYNGDTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	90.4	Hu_IGHV4-61*08	100.0	H3	18	H3-18-*	-1	ARGTEDlgycSSGSCPNH
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	90.4	Hu_IGHV4-61*08	75.0	H4	8	H4-8-1	13	IDTSKNEF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	91.3	Hu_IGKV1-39*01	63.6	L1	11	L1-11-1	9	RPSQNIRSFLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	91.3	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	5	YAASNLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	91.3	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	8	QQSYNTPPT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	91.3	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	12	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022