PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6O9I

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Mo_IGHV5-17*02	100.0	Mo_IGHV5-17*02	100.0	H1	13	H1-13-1	8	AASGFTFSSFGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Mo_IGHV5-17*02	100.0	Mo_IGHV5-17*02	100.0	H2	10	H2-10-2	9	YISSGSSTIY	BBBAALABBB
A	heavy	Homo.sapiens	Mo_IGHV5-17*02	100.0	Mo_IGHV5-17*02	100.0	H3	11	H3-11-*	-1	ARGKYPTWIAY	BBBBBaBABAB
A	heavy	Homo.sapiens	Mo_IGHV5-17*02	100.0	Mo_IGHV5-17*02	100.0	H4	8	H4-8-1	8	RDNPKNTL	BBAAALBB
B	kappa	Homo.sapiens	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L1	17	L1-17-1	9	KSSQSLlnsgnqKNYLT	BBABBABBAAALBBBBB
B	kappa	Homo.sapiens	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	75.0	L2	8	L2-8-1	7	SWASTRDS	BLLABBBB
B	kappa	Homo.sapiens	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	12	QNDYSYPLT	BBAABBbBB
B	kappa	Homo.sapiens	Mo_IGKV8-19*01	100.0	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Mo_IGHV1S81*01	96.7	Mo_IGHV1S81*01	84.6	H1	13	H1-13-1	11	RASGYTFTSNWMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Mo_IGHV1S81*01	96.7	Mo_IGHV1S81*01	90.0	H2	10	H2-10-1	9	EINPSNGRSN	BBBAAALBBB
D	heavy	Homo.sapiens	Mo_IGHV1S81*01	96.7	Mo_IGHV1S81*01	0.0	H3	12	H3-12-3	20	ARFYYGTSWFAY	BBBBBLBABBAB
D	heavy	Homo.sapiens	Mo_IGHV1S81*01	96.7	Mo_IGHV1S81*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
E	kappa	Homo.sapiens	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	93.8	L1	16	L1-16-1	12	RSSQSLvhsngDTYLH	BBABBABBAALBBBBB
E	kappa	Homo.sapiens	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLEABBBB
E	kappa	Homo.sapiens	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L3	10	L3-10-cis78-1	8	SQSTHVpPFT	BBAABBbbBB
E	kappa	Homo.sapiens	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022