PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6O8D

#CDRs = 8; #Clusters = 14.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Ra_IGHV6-8*01	76.9	H1	13	H1-13-1	18	AASGFTFTKAWMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Ra_IGHV6-8*01	83.3	H2	12	H2-12-1	14	QIKDKSNsyATY	BBBBAABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	0.0	H3	12	H3-12-*	-1	RGVYYALSPFDY	BBBBABABBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	87.5	H4	8	H4-8-1	9	RDDSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV1-2*06	84.6	H1	13	H1-13-*	-1	KASGYTFTSYYIH	BBBLBBAABLLBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV1-2*06	40.0	H2	10	H2-10-*	-1	SIYPGNVNTN	BBBAABABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV1-2*06	50.0	H3	13	H3-13-*	-1	TRSHYGLDWNFDV	BBBBBLBAABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV1-2*06	87.5	H4	8	H4-8-1	13	VDTSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.6	Ra_IGKV1S21*01	87.5	L1	16	L1-16-1	22	KSSQSLvhnnaNTYLS	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.6	Ra_IGKV1S21*01	100.0	L2	8	L2-8-*	-1	YKVSNRFS	AAAABBBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.6	Hu_IGKV2D-29*02	42.9	L3	9	L3-9-cis7-1	16	GQGTQYPFT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.6	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.6	Hu_IGKV1-33*01	63.6	L1	11	L1-11-*	-1	QASQNIYVWLN	BBABBBABABB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.6	Hu_IGKV1-33*01	75.0	L2	8	L2-8-*	-1	YKASNLHT	BBABBBBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.6	Hu_IGKV1-33*01	42.9	L3	9	L3-9-cis7-*	-1	QQGQTYPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.6	Hu_IGKV1-33*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022