PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6O41

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	9	RASQSVSsSYLA	BBABBBBAAABB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	5	YGASSRAT	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-3	25	QQYGTSQST	BBBBAABBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBEEBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H2	10	H2-10-1	16	GIIPIFGTAN	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H3	17	H3-17-*	-1	AREGEGWFgkpLRAFEF
B	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H4	8	H4-8-1	8	ADKSTSTA	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	6	RASQSVSsSYLA	BBABBBBAAABB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	5	YGASSRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-*	-1	QQYGTSQST	BBBBAABBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBEBEAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H2	10	H2-10-1	23	GIIPIFGTAN	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H3	17	H3-17-*	-1	AREGEGWFgkpLRAFEF
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H4	8	H4-8-1	9	ADKSTSTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBLBBBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H2	10	H2-10-1	12	GIIPIFGTAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H3	17	H3-17-*	-1	AREGEGWFgkpLRAFEF
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H4	8	H4-8-1	8	ADKSTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	7	RASQSVSsSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	5	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-3	23	QQYGTSQST	BBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022