PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6O3L

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	75.3	Hu_IGHV1-69*17	76.9	H1	13	H1-13-1	17	KASGGSFSSYAFN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	75.3	Hu_IGHV1-69*17	40.0	H2	10	H2-10-1	17	GIVPLVSSTN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	75.3	Hu_IGHV1-69*17	100.0	H3	17	H3-17-*	-1	AREGEGWFgrpLRAFEF
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	75.3	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	5	ADRSTSTV	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	75.0	L1	12	L1-12-2	9	RASQSVSgGALA	BBABBBBLLBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	5	YGTSGRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	71.4	L3	9	L3-9-2	13	QQYGTSQST	BBAABABBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	83.3	L4	6	L4-6-3	11	GSETDF	EBAABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	75.3	Hu_IGHV1-69*17	76.9	H1	13	H1-13-1	17	KASGGSFSSYAFN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	75.3	Hu_IGHV1-69*17	40.0	H2	10	H2-10-1	15	GIVPLVSSTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	75.3	Hu_IGHV1-69*17	100.0	H3	17	H3-17-*	-1	AREGEGWFgrpLRAFEF
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	75.3	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	5	ADRSTSTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	75.0	L1	12	L1-12-2	7	RASQSVSgGALA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	4	YGTSGRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	71.4	L3	9	L3-9-2	11	QQYGTSQST	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	83.3	L4	6	L4-6-1	8	GSETDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022