PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6O3J

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	76.7	Hu_IGHV1-69*17	61.5	H1	13	H1-13-1	19	KATGGTFSTLAFN	BBBLEBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	76.7	Hu_IGHV1-69*17	60.0	H2	10	H2-10-1	20	GIVPLFSIVN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	76.7	Hu_IGHV1-69*17	100.0	H3	17	H3-17-*	-1	AREGEGWFgkpLRAFEF
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	76.7	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	13	ADKSTTTV	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	89.9	Hu_IGKV3D-20*02	75.0	L1	12	L1-12-2	8	RASQSVSgGALA	BBABBBBLLBBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	89.9	Hu_IGKV3D-20*02	75.0	L2	8	L2-8-1	14	YDTSSRPT	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	89.9	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-2	14	QQYGTSQST	BBAABABBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	89.9	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	76.7	Hu_IGHV1-69*17	61.5	H1	13	H1-13-*	-1	KATGGTFSTLAFN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	76.7	Hu_IGHV1-69*17	60.0	H2	10	H2-10-1	17	GIVPLFSIVN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	76.7	Hu_IGHV1-69*17	100.0	H3	17	H3-17-*	-1	AREGEGWFgkpLRAFEF
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	76.7	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	7	ADKSTTTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	89.9	Hu_IGKV3D-20*02	75.0	L1	12	L1-12-2	7	RASQSVSgGALA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	89.9	Hu_IGKV3D-20*02	75.0	L2	8	L2-8-1	14	YDTSSRPT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	89.9	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-2	13	QQYGTSQST	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	89.9	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022