PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6O3B

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBBBABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	9	YSASSLYS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-*	-1	QQWAYGPFT	BBBBLEBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	10	RSGTDF	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	61.5	H1	13	H1-13-1	9	AASGFNIYYYSMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	50.0	H2	10	H2-10-*	-1	SIYSSYSYTS	BBBAABABBB
B	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	100.0	H3	13	H3-13-*	-1	ARSSPGADYGLDY	BBBBBLALLBBAB
B	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	50.0	H4	8	H4-8-1	7	ADTSKNTA	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABAABABBB
E	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	9	YSASSLYS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-*	-1	QQWAYGPFT	BBBBLEBBB
E	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	13	RSGTDF	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	61.5	H1	13	H1-13-1	12	AASGFNIYYYSMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	50.0	H2	10	H2-10-1	13	SIYSSYSYTS	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	100.0	H3	13	H3-13-*	-1	ARSSPGADYGLDY	BBBBAAALLBBAB
G	heavy	Homo.sapiens	Hu_IGHV3-74*01	91.8	Hu_IGHV3-74*01	50.0	H4	8	H4-8-1	11	ADTSKNTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022