PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6O2A

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H1	13	H1-13-1	8	TASGFTFGDYAMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	83.3	H2	12	H2-12-1	15	FIRSkaNGGRTE	BBBBAAALLBBB
A	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H3	13	H3-13-*	-1	TRVELGSSWSLGY	BBBBBEABBBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H4	8	H4-8-1	4	RDDSKSIA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	6	RASQSVSsTYLA	BBABBBBAAABB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	10	YGASSRAT	BEAABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	7	QQYGSSPWT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H1	13	H1-13-1	8	TASGFTFGDYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	83.3	H2	12	H2-12-1	15	FIRSkaNGGRTE	BBBBAAALLBBB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H3	13	H3-13-*	-1	TRVELGSSWSLGY	BBBBBEABBBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H4	8	H4-8-1	5	RDDSKSIA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	5	RASQSVSsTYLA	BBABBBBAAABB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	10	YGASSRAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	7	QQYGSSPWT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H1	13	H1-13-1	8	TASGFTFGDYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	83.3	H2	12	H2-12-1	15	FIRSkaNGGRTE	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H3	13	H3-13-*	-1	TRVELGSSWSLGY	BBBBBEABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H4	8	H4-8-1	5	RDDSKSIA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	6	RASQSVSsTYLA	BBABBBBAAABB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	23	YGASSRAT	BEAABBBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	7	QQYGSSPWT	BBAABBbBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
O	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H1	13	H1-13-1	8	TASGFTFGDYAMS	BBBLBBAAABBBB
O	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	83.3	H2	12	H2-12-1	15	FIRSkaNGGRTE	BBBBAAALLBBB
O	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H3	13	H3-13-*	-1	TRVELGSSWSLGY	BBBBBEABBBBAB
O	heavy	Homo.sapiens	Hu_IGHV3-49*04	97.3	Hu_IGHV3-49*04	100.0	H4	8	H4-8-1	5	RDDSKSIA	BBAAALBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	6	RASQSVSsTYLA	BBABBBBAAABB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	11	YGASSRAT	BEAABBBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	7	QQYGSSPWT	BBAABBbBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022