PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6NYQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S95*01	86.7	Mo_IGHV1S95*01	76.9	H1	13	H1-13-1	6	KASGYTVTSYWID	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S95*01	86.7	Mo_IGHV1S95*01	70.0	H2	10	H2-10-1	6	RIAPGSSNTY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S95*01	86.7	Mo_IGHV1S95*01	0.0	H3	12	H3-12-*	-1	AREITSATAMEY	BBBBAALABBAB
H	heavy	Mus.musculus	Mo_IGHV1S95*01	86.7	Mo_IGHV1S95*01	87.5	H4	8	H4-8-1	8	VDISSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	94.2	Mo_IGKV12-41*01	72.7	L1	11	L1-11-2	8	RTSGDIHSYLA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	94.2	Mo_IGKV12-41*01	87.5	L2	8	L2-8-1	6	YNAKTLVD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	94.2	Mo_IGKV12-41*01	71.4	L3	9	L3-9-cis7-*	-1	QHFWTPPWT	BBABBBbBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	94.2	Mo_IGKV12-41*01	83.3	L4	6	L4-6-1	9	GSVTQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022