PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6NOV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	95.9	Mo_IGHV1-39*01	76.9	H1	13	H1-13-1	8	KASGYSFTDYHIH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	95.9	Mo_IGHV1-39*01	80.0	H2	10	H2-10-1	6	VINPMYGTTD	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	95.9	Hu_IGHV1-69*15	100.0	H3	12	H3-12-1	16	ARYDYFTGTGVY	BBBBAAALBBAB
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	95.9	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	7	ADESTSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2D-29*02	100.0	Mo_IGKV1-110*01	87.5	L1	16	L1-16-*	-1	RSSRSLvhsrgNTYLH	BBABBABABBLBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2D-29*02	100.0	Mo_IGKV1-110*01	87.5	L2	8	L2-8-1	8	YKVSNRFI	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV2D-29*02	100.0	Hu_IGKV2D-29*02	57.1	L3	9	L3-9-cis7-1	7	SQSTHLPFT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV2D-29*02	100.0	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	95.9	Mo_IGHV1-39*01	76.9	H1	13	H1-13-1	8	KASGYSFTDYHIH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	95.9	Mo_IGHV1-39*01	80.0	H2	10	H2-10-1	6	VINPMYGTTD	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	95.9	Hu_IGHV1-69*15	100.0	H3	12	H3-12-1	16	ARYDYFTGTGVY	BBBBAAALBBAB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	95.9	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	9	ADESTSTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2D-29*02	100.0	Mo_IGKV1-110*01	87.5	L1	16	L1-16-*	-1	RSSRSLvhsrgNTYLH	BBABBABABBLBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2D-29*02	100.0	Mo_IGKV1-110*01	87.5	L2	8	L2-8-1	8	YKVSNRFI	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV2D-29*02	100.0	Hu_IGKV2D-29*02	57.1	L3	9	L3-9-cis7-1	7	SQSTHLPFT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV2D-29*02	100.0	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022