PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6NIP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-59*04	90.4	Hu_IGHV4-59*04	76.9	H1	13	H1-13-1	19	TVSGASISNFYWS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*04	90.4	Hu_IGHV4-59*04	44.4	H2	9	H2-9-1	11	SIYYTGTIT	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*04	90.4	Hu_IGHV4-59*04	100.0	H3	14	H3-14-*	-1	AGLDRFNWNDEGDC	BBBBAALABAAEBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*04	90.4	Hu_IGHV4-59*04	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	95.6	Hu_IGLV1-44*01	76.9	L1	13	L1-13-1	14	SGSRSNLGRNTVN	BBBAAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	95.6	Hu_IGLV1-44*01	87.5	L2	8	L2-8-1	13	YSNNRRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	95.6	Hu_IGLV1-44*01	100.0	L3	12	L3-12-*	-1	AAWDDSLNGlYV
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	95.6	Hu_IGLV1-44*01	83.3	L4	6	L4-6-3	29	KSDTSA	BBAABB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	90.4	Hu_IGHV4-59*04	76.9	H1	13	H1-13-1	19	TVSGASISNFYWS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	90.4	Hu_IGHV4-59*04	44.4	H2	9	H2-9-1	11	SIYYTGTIT	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	90.4	Hu_IGHV4-59*04	100.0	H3	14	H3-14-*	-1	AGLDRFNWNDEGDC	BBBBABALBAAEBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	90.4	Hu_IGHV4-59*04	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	95.6	Hu_IGLV1-44*01	76.9	L1	13	L1-13-1	13	SGSRSNLGRNTVN	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	95.6	Hu_IGLV1-44*01	87.5	L2	8	L2-8-1	13	YSNNRRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	95.6	Hu_IGLV1-44*01	100.0	L3	12	L3-12-*	-1	AAWDDSLNGlYV
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	95.6	Hu_IGLV1-44*01	83.3	L4	6	L4-6-3	28	KSDTSA	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022