PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6NC3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	22	RAFGYTFTGNALH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPHSGDTT	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	10	RDKSINTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	22	RASQGVRNELA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	16	YYASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	30	QHMSSYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTHF	EBEABB
O	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	22	RAFGYTFTGNALH	BBBLBBAAABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPHSGDTT	BBBAAALBBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
O	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	10	RDKSINTA	BBAAALBB
P	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	22	RAFGYTFTGNALH	BBBLBBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPHSGDTT	BBBAAALBBB
P	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
P	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	10	RDKSINTA	BBAAALBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	22	RAFGYTFTGNALH	BBBLBBAAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPHSGDTT	BBBAAALBBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
Q	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	10	RDKSINTA	BBAAALBB
R	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	22	RAFGYTFTGNALH	BBBLBBAAABBBB
R	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPHSGDTT	BBBAAALBBB
R	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
R	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	10	RDKSINTA	BBAAALBB
S	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	22	RAFGYTFTGNALH	BBBLBBAAABBBB
S	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPHSGDTT	BBBAAALBBB
S	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
S	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	10	RDKSINTA	BBAAALBB
T	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	22	RASQGVRNELA	BBABBAEABBB
T	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	16	YYASTLQS	BLLABBBB
T	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	30	QHMSSYPLT	BBAABBbBB
T	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTHF	EBEABB
U	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	22	RASQGVRNELA	BBABBAEABBB
U	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	16	YYASTLQS	BLLABBBB
U	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	30	QHMSSYPLT	BBAABBbBB
U	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTHF	EBEABB
V	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	22	RASQGVRNELA	BBABBAEABBB
V	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	16	YYASTLQS	BLLABBBB
V	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	30	QHMSSYPLT	BBAABBbBB
V	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTHF	EBEABB
W	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	22	RASQGVRNELA	BBABBAEABBB
W	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	16	YYASTLQS	BLLABBBB
W	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	30	QHMSSYPLT	BBAABBbBB
W	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTHF	EBEABB
X	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	22	RASQGVRNELA	BBABBAEABBB
X	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	16	YYASTLQS	BLLABBBB
X	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	30	QHMSSYPLT	BBAABBbBB
X	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	8	GSGTHF	EBEABB

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