PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6NB5

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-15*01	91.8	Hu_IGHV3-15*01	76.9	H1	13	H1-13-1	13	EASGLTFSNVWMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*01	91.8	Hu_IGHV3-15*01	66.7	H2	12	H2-12-1	11	RIKRKSegATTD	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*01	91.8	Hu_IGHV3-15*01	50.0	H3	18	H3-18-*	-1	STLTRggdvwsssyYFDY
H	heavy	Homo.sapiens	Hu_IGHV3-15*01	91.8	Hu_IGHV3-15*01	87.5	H4	8	H4-8-1	13	RDDSKNTV	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-15*01	91.8	Hu_IGHV3-15*01	76.9	H1	13	H1-13-*	-1	EASGLTFSNVWMS	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-15*01	91.8	Hu_IGHV3-15*01	66.7	H2	12	H2-12-1	9	RIKRKSegATTD	BBBBAAALLBBB
I	heavy	Homo.sapiens	Hu_IGHV3-15*01	91.8	Hu_IGHV3-15*01	50.0	H3	18	H3-18-*	-1	STLTRGgdvwsssyYFDY
I	heavy	Homo.sapiens	Hu_IGHV3-15*01	91.8	Hu_IGHV3-15*01	87.5	H4	8	H4-8-1	8	RDDSKNTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*03	94.1	Hu_IGLV2-23*03	85.7	L1	14	L1-14-*	-1	TGTSSDVGTyDLVS	BBBAAAAAABBBBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*03	94.1	Hu_IGLV2-23*03	62.5	L2	8	L2-8-*	-1	YADIKRPS	BLLABBBA
L	lambda	Homo.sapiens	Hu_IGLV2-23*03	94.1	Hu_IGLV2-23*03	77.8	L3	11	L3-11-*	-1	CLYAGSSTSVI	BBBBBBLBBBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*03	94.1	Hu_IGLV2-23*03	100.0	L4	6	L4-6-3	27	KSGNTA	BBAABB
M	lambda	Homo.sapiens	Hu_IGLV2-23*03	94.1	Hu_IGLV2-23*03	85.7	L1	14	L1-14-2	15	TGTSSDVGTyDLVS	BBBAAAAAABBBBB
M	lambda	Homo.sapiens	Hu_IGLV2-23*03	94.1	Hu_IGLV2-23*03	62.5	L2	8	L2-8-*	-1	YADIKRPS	BLEABBBA
M	lambda	Homo.sapiens	Hu_IGLV2-23*03	94.1	Hu_IGLV2-23*03	77.8	L3	11	L3-11-*	-1	CLYAGSSTSVI	BBBBBBLBBBB
M	lambda	Homo.sapiens	Hu_IGLV2-23*03	94.1	Hu_IGLV2-23*03	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022