PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6N81

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	76.9	H1	13	H1-13-1	9	AASGFTLSNYAMT	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	70.0	H2	10	H2-10-*	-1	SIGGSGGTTY	BBBBAAEEBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	100.0	H3	17	H3-17-*	-1	AKDKTRTlrlGYSGMDV
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	75.0	H4	8	H4-8-1	12	RDSSMNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	6	RASQSISSYLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	5	YGASSLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	5	QQSFSTPRT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	76.9	H1	13	H1-13-1	8	AASGFTLSNYAMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	70.0	H2	10	H2-10-*	-1	SIGGSGGTTY	BBBBAAEEBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	100.0	H3	17	H3-17-*	-1	AKDKTRTlrlGYSGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	75.0	H4	8	H4-8-1	8	RDSSMNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	4	RASQSISSYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	8	YGASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	7	QQSFSTPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022