PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6N5B

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-9-1*02	95.9	Mo_IGHV5-9-1*02	84.6	H1	13	H1-13-1	8	AASGFTFSNYDMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*02	95.9	Mo_IGHV5-9-1*02	100.0	H2	10	H2-10-2	10	YISSGGDYIY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*02	95.9	Mo_IGHV5-9-1*02	100.0	H3	15	H3-15-*	-1	TRNYYYGSlPVWFAY
H	heavy	Mus.musculus	Mo_IGHV5-9-1*02	95.9	Mo_IGHV5-9-1*02	100.0	H4	8	H4-8-1	9	RDNARNTL	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-1	10	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-*	-1	GGTNNRAP	BLLABBBA
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	10	L3-10-*	-1	ALWYSNHSWV	BBBBAABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	18	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022