PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6MWV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	92.3	H1	13	H1-13-1	15	KASGYTFTEYPML	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	80.0	H2	10	H2-10-1	19	LIYTNTGEPT	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	100.0	H3	10	H3-10-*	-1	VRDYFISLDY	BBBBLLBBAB
C	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	87.5	H4	8	H4-8-1	15	LEISASTA	BBAAALBB
D	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	71.4	L1	14	L1-14-1	9	RSNIGAVTsSNCAN	BBAAEBBBAAALBB
D	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	62.5	L2	8	L2-8-1	11	GDTNNRRS	BLEABBBB
D	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	62.5	L3	9	L3-9-4	12	ALWYNNLWV	BBBBLABBB
D	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L4	6	L4-6-2	17	LIGDKA	BBEABB
G	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	92.3	H1	13	H1-13-1	15	KASGYTFTEYPML	BBBLBBAAABBBB
G	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	80.0	H2	10	H2-10-1	19	LIYTNTGEPT	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	100.0	H3	10	H3-10-*	-1	VRDYFISLDY	BBBBLLBBAB
G	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	87.5	H4	8	H4-8-1	15	LEISASTA	BBAAALBB
H	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	71.4	L1	14	L1-14-1	9	RSNIGAVTsSNCAN	BBAAEBBBAAALBB
H	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	62.5	L2	8	L2-8-1	11	GDTNNRRS	BLEABBBB
H	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	62.5	L3	9	L3-9-4	12	ALWYNNLWV	BBBBLABBB
H	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L4	6	L4-6-2	17	LIGDKA	BBEABB
K	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	92.3	H1	13	H1-13-1	15	KASGYTFTEYPML	BBBLBBAAABBBB
K	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	80.0	H2	10	H2-10-1	19	LIYTNTGEPT	BBBAAALBBB
K	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	100.0	H3	10	H3-10-*	-1	VRDYFISLDY	BBBBLLBBAB
K	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	87.5	H4	8	H4-8-1	15	LEISASTA	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	71.4	L1	14	L1-14-1	9	RSNIGAVTsSNCAN	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	62.5	L2	8	L2-8-1	11	GDTNNRRS	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	62.5	L3	9	L3-9-4	12	ALWYNNLWV	BBBBLABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L4	6	L4-6-2	17	LIGDKA	BBEABB
O	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	92.3	H1	13	H1-13-1	15	KASGYTFTEYPML	BBBLBBAAABBBB
O	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	80.0	H2	10	H2-10-1	19	LIYTNTGEPT	BBBAAALBBB
O	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	100.0	H3	10	H3-10-*	-1	VRDYFISLDY	BBBBLLBBAB
O	heavy	Mus.musculus	Mo_IGHV9-1*01	90.4	Mo_IGHV9-1*01	87.5	H4	8	H4-8-1	15	LEISASTA	BBAAALBB
P	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	71.4	L1	14	L1-14-1	9	RSNIGAVTsSNCAN	BBAAEBBBAAALBB
P	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	62.5	L2	8	L2-8-1	11	GDTNNRRS	BLEABBBB
P	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	62.5	L3	9	L3-9-4	12	ALWYNNLWV	BBBBLABBB
P	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L4	6	L4-6-2	17	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022