PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6MHR

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	100.0	H1	13	H1-13-1	23	AVYGGSFSGYYWS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	55.6	H2	9	H2-9-1	14	EINHGGYVT	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	100.0	H3	15	H3-15-*	-1	ARDYGpGNYDWYFDL
A	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	100.0	H4	8	H4-8-1	11	VDTSKNQF	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	11	RASQSVSSYLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	8	YDASNRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L3	11	L3-11-*	-1	QQRSNWPpaLT	BBBBABbBBBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	100.0	H1	13	H1-13-1	21	AVYGGSFSGYYWS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	55.6	H2	9	H2-9-1	13	EINHGGYVT	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	100.0	H3	15	H3-15-*	-1	ARDYGpGNYDWYFDL
D	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	7	RASQSVSSYLA	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-*	-1	YDASNRAT	BLLABBBA
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L3	11	L3-11-*	-1	QQRSNWPpaLT	BBBBABbBBBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022