PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6ME1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	11	RAFGYTFTGNALH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	7	WINPHSGDTT	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	9	RDKSINTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.9	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	6	RASQGVRNELA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.9	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	8	YYASTLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.9	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	11	QHMSSYPLT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.9	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	9	GSGTHF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	11	RAFGYTFTGNALH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	11	WINPHSGDTT	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
C	heavy	Homo.sapiens	Hu_IGHV1-2*02	80.0	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	9	RDKSINTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.9	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	6	RASQGVRNELA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.9	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	6	YYASTLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.9	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	12	QHMSSYPLT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.9	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	6	GSGTHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022