PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6M58

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	76.9	H1	13	H1-13-1	8	AASGFMFRAYSMN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	70.0	H2	10	H2-10-2	9	SISSSGRYIH	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	13	H3-13-*	-1	ARETVMAGKALDY	BBBBAAAEABBAB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Hu_IGKV3-11*01	81.8	L1	11	L1-11-1	9	RASQSVGSNLA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Hu_IGKV3-11*01	62.5	L2	8	L2-8-1	10	YGASTGAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Hu_IGKV3-11*01	28.6	L3	10	L3-10-*	-1	QQYYSFlAKT	BBAABAABBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Hu_IGKV3-11*01	83.3	L4	6	L4-6-2	10	RSGTDF	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	76.9	H1	13	H1-13-1	8	AASGFMFRAYSMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	70.0	H2	10	H2-10-2	9	SISSSGRYIH	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	13	H3-13-*	-1	ARETVMAGKALDY	BBBBAAAEABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Hu_IGKV3-11*01	81.8	L1	11	L1-11-1	9	RASQSVGSNLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Hu_IGKV3-11*01	62.5	L2	8	L2-8-1	10	YGASTGAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Hu_IGKV3-11*01	28.6	L3	10	L3-10-*	-1	QQYYSFlAKT	BBAABAABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Hu_IGKV3-11*01	83.3	L4	6	L4-6-2	10	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022