PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6M3B

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	lambda	Homo.sapiens	Hu_IGLV1-40*01	92.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-3	12	TGSSSNIGAAYdVH	BBBAAAAAALBBBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*01	92.5	Hu_IGLV1-40*01	75.0	L2	8	L2-8-1	13	YGNNKRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*01	92.5	Hu_IGLV1-40*01	100.0	L3	11	L3-11-1	18	QSYDSSLSGSV	BBBBAAALBBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*01	92.5	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	13	KSGTSA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	92.3	H1	13	H1-13-1	8	AASGFTFSSYWMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	30.0	H2	10	H2-10-2	8	GVSWNGSRTH	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	50.0	H3	17	H3-17-*	-1	AltgRSGWMRFPNWFDP
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	3	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022