PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LZ4

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Rattus.norvegicus	Ra_IGHV1-24*01	94.5	Ra_IGHV1-24*01	84.6	H1	13	H1-13-1	11	KASGYSFTSHYMH	BBBLBBAAABBBB
A	heavy	Rattus.norvegicus	Ra_IGHV1-24*01	94.5	Ra_IGHV1-24*01	70.0	H2	10	H2-10-1	7	WISPEQGNTK	BBBAAALBBB
A	heavy	Rattus.norvegicus	Ra_IGHV1-24*01	94.5	Ra_IGHV1-24*01	0.0	H3	9	H3-9-*	-1	VSWEDWSAY	BBBBLLBBB
A	heavy	Rattus.norvegicus	Ra_IGHV1-24*01	94.5	Ra_IGHV1-24*01	87.5	H4	8	H4-8-1	9	ADKSSSIA	BBAAALBB
B	kappa	Rattus.norvegicus	Ra_IGKV3S1*01	91.2	Ra_IGKV3S1*01	73.3	L1	15	L1-15-1	10	KTNQNVdyygNSYVH	BBABBABBLLBBBBB
B	kappa	Rattus.norvegicus	Ra_IGKV3S1*01	91.2	Ra_IGKV3S1*01	75.0	L2	8	L2-8-1	9	YLASNLAS	BLLABBBB
B	kappa	Rattus.norvegicus	Ra_IGKV3S1*01	91.2	Ra_IGKV3S1*01	71.4	L3	9	L3-9-cis7-1	4	QQSRDLPNT	BBAABBbBB
B	kappa	Rattus.norvegicus	Ra_IGKV3S1*01	91.2	Ra_IGKV3S1*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
D	heavy	Rattus.norvegicus	Ra_IGHV1-24*01	94.5	Ra_IGHV1-24*01	84.6	H1	13	H1-13-1	15	KASGYSFTSHYMH	BBBLBBAAABBBB
D	heavy	Rattus.norvegicus	Ra_IGHV1-24*01	94.5	Ra_IGHV1-24*01	70.0	H2	10	H2-10-*	-1	WISPEQGNTK	BBBAABABBB
D	heavy	Rattus.norvegicus	Ra_IGHV1-24*01	94.5	Ra_IGHV1-24*01	0.0	H3	9	H3-9-*	-1	VSWEDWSAY	BBBBLLBBB
D	heavy	Rattus.norvegicus	Ra_IGHV1-24*01	94.5	Ra_IGHV1-24*01	87.5	H4	8	H4-8-1	7	ADKSSSIA	BBAAALBB
E	kappa	Rattus.norvegicus	Ra_IGKV3S1*01	91.2	Ra_IGKV3S1*01	73.3	L1	15	L1-15-*	-1	KTNQNVdyygNSYVH	BBABBABBEABBBBB
E	kappa	Rattus.norvegicus	Ra_IGKV3S1*01	91.2	Ra_IGKV3S1*01	75.0	L2	8	L2-8-1	11	YLASNLAS	BLEABBBB
E	kappa	Rattus.norvegicus	Ra_IGKV3S1*01	91.2	Ra_IGKV3S1*01	71.4	L3	9	L3-9-cis7-1	11	QQSRDLPNT	BBAABBbBB
E	kappa	Rattus.norvegicus	Ra_IGKV3S1*01	91.2	Ra_IGKV3S1*01	100.0	L4	6	L4-6-1	26	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022