PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LYN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-76*01	86.3	Mo_IGHV1-76*01	61.5	H1	13	H1-13-1	8	KTSGYIFTNYWIH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-76*01	86.3	Mo_IGHV1-76*01	70.0	H2	10	H2-10-1	8	RIYPGTDITY	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-76*01	86.3	Mo_IGHV1-76*01	100.0	H3	11	H3-11-1	17	ARSGGYWYFDV	BBBBAALBBAB
A	heavy	Mus.musculus	Mo_IGHV1-76*01	86.3	Mo_IGHV1-76*01	62.5	H4	8	H4-8-1	6	VDKSSSSA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	93.3	L1	15	L1-15-1	9	RASKSVSisgySYMH	BBABBABBLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	7	YLASNLES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L3	9	L3-9-cis7-1	13	QHSRELPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1-76*01	86.3	Mo_IGHV1-76*01	61.5	H1	13	H1-13-1	9	KTSGYIFTNYWIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-76*01	86.3	Mo_IGHV1-76*01	70.0	H2	10	H2-10-1	9	RIYPGTDITY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-76*01	86.3	Mo_IGHV1-76*01	100.0	H3	11	H3-11-1	19	ARSGGYWYFDV	BBBBAALBBAB
H	heavy	Mus.musculus	Mo_IGHV1-76*01	86.3	Mo_IGHV1-76*01	62.5	H4	8	H4-8-1	8	VDKSSSSA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	93.3	L1	15	L1-15-1	11	RASKSVSisgySYMH	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	8	YLASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L3	9	L3-9-cis7-1	9	QHSRELPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022