PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LXJ

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-*	-1	KASGGPFSSYGFS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	9	GIIPVYGTTN	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	25	H3-25-*	-1	ARDlqdtpmvdriiGSYYYYNGLDV
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	12	ADESTSTA	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	85.7	L1	14	L1-14-*	-1	TGASSDvgdYNYVS
F	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	87.5	L2	8	L2-8-*	-1	YDVSNRPS	BLLLBBBB
F	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	66.7	L3	10	L3-10-1	8	SSYTRSSSVV	BBBBAALBBB
F	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-3	24	KSGDTA	EAAABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-*	-1	KASGGPFSSYGFS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	11	GIIPVYGTTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	25	H3-25-*	-1	ARDlqdtpmvdriiGSYYYYNGLDV
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	7	ADESTSTA	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-4	17	KASGGPFSSYGFS	BBBLBBABLBBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	9	GIIPVYGTTN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	25	H3-25-*	-1	ARDlqdtpmvdriiGSYYYYNGLDV
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	10	ADESTSTA	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	85.7	L1	14	L1-14-*	-1	TGASSDvgdYNYVS
K	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	87.5	L2	8	L2-8-1	18	YDVSNRPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	66.7	L3	10	L3-10-1	12	SSYTRSSSVV	BBBBAALBBB
K	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	16	KSGDTA	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	85.7	L1	14	L1-14-2	19	TGASSDVGdYNYVS	BBBAAAAAABBBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	87.5	L2	8	L2-8-1	14	YDVSNRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	66.7	L3	10	L3-10-1	12	SSYTRSSSVV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	13	KSGDTA	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-1	17	KASGGPFSSYGFS	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	12	GIIPVYGTTN	BBBAAALBBB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	25	H3-25-*	-1	ARDlqdtpmvdriiGSYYYYNGLDV
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	11	ADESTSTA	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	85.7	L1	14	L1-14-*	-1	TGASSDvgdYNYVS
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	87.5	L2	8	L2-8-1	13	YDVSNRPS	BLLABBBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	66.7	L3	10	L3-10-1	12	SSYTRSSSVV	BBBBAALBBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	13	KSGDTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022