PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LUN

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	7	AASGFTFSRYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	80.0	H2	10	H2-10-*	-1	VIWYDGTNKD	BBBAALBLBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	11	H3-11-1	9	AREDWAEAFDM	BBBBAALBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	7	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	7	YLGSNRAS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	85.7	L3	8	L3-8-3	4	MQALQTIT	BBAABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	8	AASGFTFSRYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	80.0	H2	10	H2-10-*	-1	VIWYDGTNKD	BBBAALBLBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	11	H3-11-1	8	AREDWAEAFDM	BBBBAALBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	6	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	7	YLGSNRAS	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	85.7	L3	8	L3-8-1	4	MQALQTIT	BBAABEBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022