PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LNT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	95.9	Hu_IGHV1-18*01	92.3	H1	13	H1-13-*	-1	KASGYTFTSYGLS
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	95.9	Hu_IGHV1-18*01	70.0	H2	10	H2-10-*	-1	WITPYNGNTK
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	95.9	Hu_IGHV1-18*01	100.0	H3	13	H3-13-*	-1	ARDSGTYAFYFDY
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	95.9	Hu_IGHV1-18*01	87.5	H4	8	H4-8-*	-1	TDTSTSTV
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	98.5	Hu_IGLV3-9*01	100.0	L1	11	L1-11-*	-1	GGNNIGSKNVH
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	98.5	Hu_IGLV3-9*01	62.5	L2	8	L2-8-*	-1	YKYVNRPS
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	98.5	Hu_IGLV3-9*01	87.5	L3	9	L3-9-*	-1	QVWDSSTYV
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	98.5	Hu_IGLV3-9*01	100.0	L4	6	L4-6-*	-1	NSGNTA
P	heavy	Homo.sapiens	Hu_IGHV1-18*01	95.9	Hu_IGHV1-18*01	92.3	H1	13	H1-13-*	-1	KASGYTFTSYGLS
P	heavy	Homo.sapiens	Hu_IGHV1-18*01	95.9	Hu_IGHV1-18*01	70.0	H2	10	H2-10-*	-1	WITPYNGNTK
P	heavy	Homo.sapiens	Hu_IGHV1-18*01	95.9	Hu_IGHV1-18*01	100.0	H3	13	H3-13-*	-1	ARDSGTYAFYFDY
P	heavy	Homo.sapiens	Hu_IGHV1-18*01	95.9	Hu_IGHV1-18*01	87.5	H4	8	H4-8-*	-1	TDTSTSTV
Q	lambda	Homo.sapiens	Hu_IGLV3-9*01	98.5	Hu_IGLV3-9*01	100.0	L1	11	L1-11-*	-1	GGNNIGSKNVH
Q	lambda	Homo.sapiens	Hu_IGLV3-9*01	98.5	Hu_IGLV3-9*01	62.5	L2	8	L2-8-*	-1	YKYVNRPS
Q	lambda	Homo.sapiens	Hu_IGLV3-9*01	98.5	Hu_IGLV3-9*01	87.5	L3	9	L3-9-*	-1	QVWDSSTYV
Q	lambda	Homo.sapiens	Hu_IGLV3-9*01	98.5	Hu_IGLV3-9*01	100.0	L4	6	L4-6-*	-1	NSGNTA

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022