PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LGW

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S111*01	95.1	Mo_IGHV1S111*01	100.0	H1	13	H1-13-1	11	KASGYTFTDYNMD	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1S111*01	95.1	Mo_IGHV1S111*01	60.0	H2	10	H2-10-1	9	DISPYYGSTG	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S111*01	95.1	Mo_IGHV1S111*01	0.0	H3	12	H3-12-*	-1	ARRNYDGSWFAY	BBBBAALABBAB
A	heavy	Mus.musculus	Mo_IGHV1S111*01	95.1	Mo_IGHV1S111*01	87.5	H4	8	H4-8-1	8	VDRSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	92.6	Mo_IGKV5-48*01	90.9	L1	11	L1-11-1	10	RASQIIGTSIH	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	92.6	Mo_IGKV5-48*01	100.0	L2	8	L2-8-1	20	KYASESIS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	92.6	Mo_IGKV5-48*01	100.0	L3	9	L3-9-cis7-1	9	QQSNSWPVT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	92.6	Mo_IGKV5-48*01	100.0	L4	6	L4-6-2	17	GSGTDF	BBEABB
C	heavy	Mus.musculus	Mo_IGHV1S111*01	95.1	Mo_IGHV1S111*01	100.0	H1	13	H1-13-1	11	KASGYTFTDYNMD	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1S111*01	95.1	Mo_IGHV1S111*01	60.0	H2	10	H2-10-1	9	DISPYYGSTG	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1S111*01	95.1	Mo_IGHV1S111*01	0.0	H3	12	H3-12-*	-1	ARRNYDGSWFAY	BBBBAALABBAB
C	heavy	Mus.musculus	Mo_IGHV1S111*01	95.1	Mo_IGHV1S111*01	87.5	H4	8	H4-8-1	7	VDRSSSTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	92.6	Mo_IGKV5-48*01	90.9	L1	11	L1-11-1	10	RASQIIGTSIH	BBABBAEABBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	92.6	Mo_IGKV5-48*01	100.0	L2	8	L2-8-1	20	KYASESIS	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	92.6	Mo_IGKV5-48*01	100.0	L3	9	L3-9-cis7-1	10	QQSNSWPVT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	92.6	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	22	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022