PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LCS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV3-8*02	93.2	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBAABBAABEBBB
A	heavy	Mus.musculus	Mo_IGHV3-8*02	93.2	Mo_IGHV3-8*02	88.9	H2	9	H2-9-1	11	YISYSGRTY	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV3-8*02	93.2	Mo_IGHV3-8*02	50.0	H3	13	H3-13-*	-1	SRPYYRYDYAIDY	BBBBAAALLBBAB
A	heavy	Mus.musculus	Mo_IGHV3-8*02	93.2	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	14	RDTSKNQY	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV4-57-1*01	89.4	Mo_IGKV4-57-1*01	91.7	L1	12	L1-12-1	11	TASSSVSsSYLH	BBABBBBAAABB
B	kappa	Mus.musculus	Mo_IGKV4-57-1*01	89.4	Mo_IGKV4-57-1*01	100.0	L2	8	L2-8-1	22	YSTSNLAS	BLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV4-57-1*01	89.4	Mo_IGKV4-57-1*01	37.5	L3	9	L3-9-cis7-1	22	QQSWKAPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV4-57-1*01	89.4	Mo_IGKV4-57-1*01	100.0	L4	6	L4-6-1	13	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022