PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LBH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV1-39*01	90.4	Mo_IGHV1-39*01	92.3	H1	13	H1-13-1	15	KASGYSFTGYNMN	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1-39*01	90.4	Mo_IGHV1-39*01	50.0	H2	10	H2-10-1	20	NISPYYGTSI	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1-39*01	90.4	Mo_IGHV1-39*01	100.0	H3	17	H3-17-*	-1	ARGESfsnYEGYYAMDY
C	heavy	Mus.musculus	Mo_IGHV1-39*01	90.4	Mo_IGHV1-39*01	87.5	H4	8	H4-8-1	14	VDRSSSTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	93.8	L1	16	L1-16-*	-1	RSSQSLvhsdgNTYLH	BBABBBBBAALBLBBB
D	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L2	8	L2-8-*	-1	YKVSNRFS	BLAABBBB
D	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	31	SQSTHVPWT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV1-39*01	90.4	Mo_IGHV1-39*01	92.3	H1	13	H1-13-1	15	KASGYSFTGYNMN	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1-39*01	90.4	Mo_IGHV1-39*01	50.0	H2	10	H2-10-1	20	NISPYYGTSI	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV1-39*01	90.4	Mo_IGHV1-39*01	100.0	H3	17	H3-17-*	-1	ARGESfsnYEGYYAMDY
E	heavy	Mus.musculus	Mo_IGHV1-39*01	90.4	Mo_IGHV1-39*01	87.5	H4	8	H4-8-1	14	VDRSSSTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	93.8	L1	16	L1-16-*	-1	RSSQSLvhsdgNTYLH	BBABBBBBAALBLBBB
F	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L2	8	L2-8-*	-1	YKVSNRFS	BLAABBBB
F	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	31	SQSTHVPWT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022