PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6KYZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H1	13	H1-13-1	6	AASGFTFSSYAMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H2	10	H2-10-2	5	VISYDGSNKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H3	19	H3-19-*	-1	ARVGKGGYdfwsgSGYMDV
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L1	11	L1-11-3	8	SGDKLGDKYAC	BBBLAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	8	YQDSKRPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	87.5	L3	9	L3-9-3	15	QAWDSSTVV	BBBBAABBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	13	NSGNTA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H1	13	H1-13-1	6	AASGFTFSSYAMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H2	10	H2-10-2	4	VISYDGSNKY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H3	19	H3-19-*	-1	ARVGKGGYdfwsgSGYMDV
E	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L1	11	L1-11-3	9	SGDKLGDKYAC	BBBLAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	8	YQDSKRPS	BLLABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	87.5	L3	9	L3-9-3	15	QAWDSSTVV	BBBBAABBB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	13	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022