PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6KVF

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	46.2	H1	13	H1-13-*	-1	KASGGTLSSYAIS	BBBEABALLBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	19	WINPNSGGTN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	50.0	H3	13	H3-13-*	-1	ASGYCSSTSCYDY	BBBBBBAABBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	12	RDTSISTA	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	92.9	L1	14	L1-14-*	-1	TLRSgINVGAYRIY	BBBBLBBAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	100.0	L2	12	L2-12-*	-1	RYksdsDKQQGS	BBABAABBBBBB
C	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	75.0	L3	9	L3-9-1	14	AIWHSSAWV	BBBBLLBBB
C	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	87.5	L4	8	L4-8-*	-1	RdaSANAG	BBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	46.2	H1	13	H1-13-*	-1	KASggtLSSYAIS
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	14	WINPNSGGTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	50.0	H3	13	H3-13-*	-1	ASGYCSSTSCYDY	BBBBBBAABBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	9	RDTSISTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	92.9	L1	14	L1-14-*	-1	TLRSgINVGAYRIY	BBBBLBBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	100.0	L2	12	L2-12-*	-1	RYksdsDKQQGS	BBABAABBBBBB
L	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	75.0	L3	9	L3-9-1	14	AIWHSSAWV	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	87.5	L4	8	L4-8-1	20	RdaSANAG	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022