PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6KTR

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	11	AASGFTFSSYAMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H2	10	H2-10-*	-1	AISGSGGSTY	BBALALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	12	H3-12-*	-1	AKDNWQELLFDY	BBBAABALBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.0	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	8	TGTSSDVGgYNYVS	BBBAAAAAABABBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.0	Hu_IGLV2-14*01	87.5	L2	8	L2-8-1	10	YDVSNRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.0	Hu_IGLV2-14*01	66.7	L3	10	L3-10-3	18	SSWTRSSGLV	BBBBAAAEBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.0	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	11	AASGFTFSSYAMS	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	8	AISGSGGSTY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	12	H3-12-*	-1	AKDNWQELLFDY	BBBAABALBBAB
F	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.0	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	7	TGTSSDVGgYNYVS	BBBAAAAAABABBB
G	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.0	Hu_IGLV2-14*01	87.5	L2	8	L2-8-1	9	YDVSNRPS	BLEABBBB
G	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.0	Hu_IGLV2-14*01	66.7	L3	10	L3-10-3	20	SSWTRSSGLV	BBBBAAAEBB
G	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.0	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022