PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6KSN

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	CDRLenMismatch	-1.0	H1	16	H1-16-*	-1	AASGYmysTYSTYCMG
A	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-3	8	FIKRGDHSTY	BBBBEALBBB
A	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	0.0	H3	21	H3-21-*	-1	AADFAHsfllsvhSGAGQYSY
A	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-1	12	QDSAKNTV	BBAAALBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	CDRLenMismatch	-1.0	H1	16	H1-16-*	-1	AASGYmysTYSTYCMG
B	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	7	FIKRGDHSTY	BBBAAALBBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	0.0	H3	21	H3-21-*	-1	AADFAHsfllsvhSGAGQYSY
B	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-1	13	QDSAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022