PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6KDH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-5*01	95.9	Mo_IGHV1-5*01	84.6	H1	13	H1-13-1	9	KASGYTFTNYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	95.9	Mo_IGHV1-5*01	80.0	H2	10	H2-10-1	11	TIYPGNSDTT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	95.9	Mo_IGHV1-5*01	50.0	H3	13	H3-13-*	-1	SRRNYGSSYAMDY	BBBBBEABBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	95.9	Mo_IGHV1-5*01	87.5	H4	8	H4-8-1	13	AVTSTSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	81.2	L1	16	L1-16-*	-1	RSSQNIvhsdgYTYLE
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	8	YTVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	85.7	L3	8	L3-8-*	-1	FRGSHVPT	BBABEBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022