PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6JHS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	80.0	L1	10	L1-10-1	17	SAASSVSYIH	BBABBBABBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	75.0	L2	8	L2-8-*	-1	YDTSRLAF	BAAABBBA
D	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	75.0	L3	9	L3-9-*	-1	QQWSTNPYT	BBAABAALB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	100.0	L4	6	L4-6-1	16	GSGTSY	EBEABB
E	heavy	Mus.musculus	Mo_IGHV5-6*03	94.5	Mo_IGHV5-6*03	69.2	H1	13	H1-13-*	-1	AASIHTFNCYGMS	BBBABBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV5-6*03	94.5	Mo_IGHV5-6*03	60.0	H2	10	H2-10-*	-1	TIDAASSYTY	BBBABAABBB
E	heavy	Mus.musculus	Mo_IGHV5-6*03	94.5	Mo_IGHV5-6*03	100.0	H3	14	H3-14-*	-1	ARRDNTTAQYYFDY	BBBBBBAABBBBAB
E	heavy	Mus.musculus	Mo_IGHV5-6*03	94.5	Mo_IGHV5-6*03	100.0	H4	8	H4-8-1	11	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022