PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6J15

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	84.6	H1	13	H1-13-*	-1	KGsghtFTDYALH
A	heavy	Mus.musculus	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	50.0	H2	10	H2-10-1	9	VISSYNGITN	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	50.0	H3	13	H3-13-*	-1	SREEWDVFYYFDY	BBBBAABABABAB
A	heavy	Mus.musculus	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	100.0	H4	8	H4-8-1	9	VDKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	92.8	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	8	RSSQGIvhsdgNTYLE	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	92.8	Mo_IGKV1-117*01	100.0	L2	8	L2-8-4	12	YKVSNRFS	BEAABBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	92.8	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	10	FQGSHVPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	92.8	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	84.6	H1	13	H1-13-*	-1	KGsghtftDYALH
H	heavy	Mus.musculus	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	50.0	H2	10	H2-10-1	15	VISSYNGITN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	50.0	H3	13	H3-13-*	-1	SREEWDVFYYFDY	BBBBBLBABABAB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	100.0	H4	8	H4-8-1	9	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	92.8	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	8	RSSQGIvhsdgNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	92.8	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	92.8	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	10	FQGSHVPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	92.8	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022