PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6IW2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	69.2	H1	13	H1-13-*	-1	TVSGGSTYNHHWS	BBBLBBAABEBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	66.7	H2	9	H2-9-1	15	YISYSGKSN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	AREYRddtNYYYYSLDV
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	37.5	H4	8	H4-8-1	12	LEPSTTQF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	7	RASQSIGSWLA	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	8	YKASSLES	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	10	QQYNNYSYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	15	GSGTEF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	69.2	H1	13	H1-13-*	-1	TVSGGSTYNHHWS	BBBLBBAABEBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	66.7	H2	9	H2-9-1	15	YISYSGKSN	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	AREYRddtNYYYYSLDV
E	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	37.5	H4	8	H4-8-1	11	LEPSTTQF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	7	RASQSIGSWLA	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	8	YKASSLES	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	10	QQYNNYSYT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	15	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	69.2	H1	13	H1-13-*	-1	TVSGGSTYNHHWS	BBBLBBAABEBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	66.7	H2	9	H2-9-1	15	YISYSGKSN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	AREYRddtNYYYYSLDV
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	37.5	H4	8	H4-8-1	11	LEPSTTQF	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	6	RASQSIGSWLA	BBABBAEABBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	8	YKASSLES	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	10	QQYNNYSYT	BBAABBbBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	15	GSGTEF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	69.2	H1	13	H1-13-*	-1	TVSGGSTYNHHWS	BBBLBBAABEBBB
K	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	66.7	H2	9	H2-9-1	15	YISYSGKSN	BBBAALBBB
K	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	AREYRddtNYYYYSLDV
K	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	37.5	H4	8	H4-8-1	12	LEPSTTQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	7	RASQSIGSWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	8	YKASSLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	10	QQYNNYSYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	14	GSGTEF	EBEABB
N	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	69.2	H1	13	H1-13-*	-1	TVSGGSTYNHHWS	BBBLBBAABEBBB
N	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	66.7	H2	9	H2-9-1	15	YISYSGKSN	BBBAALBBB
N	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	AREYRddtNYYYYSLDV
N	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	37.5	H4	8	H4-8-1	11	LEPSTTQF	BBAAALBB
O	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	6	RASQSIGSWLA	BBABBAEABBB
O	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	8	YKASSLES	BLLABBBB
O	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	10	QQYNNYSYT	BBAABBbBB
O	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	15	GSGTEF	EBEABB
Q	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	69.2	H1	13	H1-13-*	-1	TVSGGSTYNHHWS	BBBLBBAABEBBB
Q	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	66.7	H2	9	H2-9-1	15	YISYSGKSN	BBBAALBBB
Q	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	AREYRddtNYYYYSLDV
Q	heavy	Homo.sapiens	Hu_IGHV4-59*11	84.9	Hu_IGHV4-59*11	37.5	H4	8	H4-8-1	12	LEPSTTQF	BBAAALBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	6	RASQSIGSWLA	BBABBAEABBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	8	YKASSLES	BLLABBBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	10	QQYNNYSYT	BBAABBbBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*03	97.1	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	15	GSGTEF	EBEABB

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