PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6IUV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	89.0	Hu_IGHV5-10-1*01	61.5	H1	13	H1-13-*	-1	KVSGNNFPSYYIS	BBBEALBbBBBBB
C	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	89.0	Hu_IGHV5-10-1*01	90.0	H2	10	H2-10-1	11	RIDPSDSDTN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	89.0	Hu_IGHV5-10-1*01	100.0	H3	19	H3-19-*	-1	ARRATYYYgsgsyFDAFDI
C	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	89.0	Hu_IGHV5-10-1*01	87.5	H4	8	H4-8-1	14	ADKSTSTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	93.8	L1	16	L1-16-1	6	RSSQSLlhsdgYNYLD	BBABBABBAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	87.5	L2	8	L2-8-1	5	YLGSHRAS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	100.0	L3	8	L3-8-3	11	MQALQTPD	BBAABBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	89.0	Hu_IGHV5-10-1*01	61.5	H1	13	H1-13-*	-1	KVSGNNFPSYYIS	BBBEALBbBBBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	89.0	Hu_IGHV5-10-1*01	90.0	H2	10	H2-10-1	11	RIDPSDSDTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	89.0	Hu_IGHV5-10-1*01	100.0	H3	19	H3-19-*	-1	ARRATYYYgsgsyFDAFDI
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	89.0	Hu_IGHV5-10-1*01	87.5	H4	8	H4-8-1	12	ADKSTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	93.8	L1	16	L1-16-1	6	RSSQSLlhsdgYNYLD	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	87.5	L2	8	L2-8-1	5	YLGSHRAS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	100.0	L3	8	L3-8-3	10	MQALQTPD	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022