PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6II4

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	97.3	Hu_IGHV3-30-3*02	92.3	H1	13	H1-13-1	11	AASGFTFSSYAIH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	97.3	Hu_IGHV3-30-3*02	90.0	H2	10	H2-10-2	12	LISYDGSNKY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	97.3	Hu_IGHV3-30-3*02	0.0	H3	16	H3-16-*	-1	NGHGSggEVGSNWFDP
E	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	97.3	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	9	TRSSGSIASNYVQ	BBABEBAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	87.5	L2	8	L2-8-1	14	YEYNQRPS	BLLABBBB
F	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	85.7	L3	9	L3-9-3	23	QSYDSANRV	BBBBAABBB
F	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	11	idSSSNSA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	97.3	Hu_IGHV3-30-3*02	92.3	H1	13	H1-13-1	12	AASGFTFSSYAIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	97.3	Hu_IGHV3-30-3*02	90.0	H2	10	H2-10-2	11	LISYDGSNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	97.3	Hu_IGHV3-30-3*02	0.0	H3	16	H3-16-*	-1	NGHGSggEVGSNWFDP
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	97.3	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	10	TRSSGSIASNYVQ	BBABEBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	87.5	L2	8	L2-8-1	11	YEYNQRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	85.7	L3	9	L3-9-*	-1	QSYDSANRV	BBBBAABBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	10	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022