PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6IEK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV1-24*01	100.0	Hu_IGHV1-24*01	100.0	H1	13	H1-13-1	16	KVSGYTLTELSMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-24*01	100.0	Hu_IGHV1-24*01	90.0	H2	10	H2-10-1	17	GFDREDGETI	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-24*01	100.0	Hu_IGHV1-24*01	50.0	H3	14	H3-14-*	-1	AIDPIRYNWNYGDY	BBBAAAAAABABBA
B	heavy	Homo.sapiens	Hu_IGHV1-24*01	100.0	Hu_IGHV1-24*01	100.0	H4	8	H4-8-1	8	EDTSTDTA	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	85.7	L1	14	L1-14-*	-1	TLpSDISVSSYNIY	BBBAABBAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	100.0	L2	12	L2-12-*	-1	YYysdsDKGQGS	BBABAABBBBBB
C	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	87.5	L3	9	L3-9-*	-1	MIWPSNAWV	BBBABBBBB
C	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	87.5	L4	8	L4-8-1	9	KdaSDNTG	BBAAALBB
E	heavy	Homo.sapiens	Hu_IGHV1-24*01	100.0	Hu_IGHV1-24*01	100.0	H1	13	H1-13-1	16	KVSGYTLTELSMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-24*01	100.0	Hu_IGHV1-24*01	90.0	H2	10	H2-10-1	15	GFDREDGETI	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-24*01	100.0	Hu_IGHV1-24*01	50.0	H3	14	H3-14-*	-1	AIDPIRYNWNYGDY	BBBAAAAAABABBA
E	heavy	Homo.sapiens	Hu_IGHV1-24*01	100.0	Hu_IGHV1-24*01	100.0	H4	8	H4-8-1	8	EDTSTDTA	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	85.7	L1	14	L1-14-*	-1	TLpSDISVSSYNIY	BBBAABBAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	100.0	L2	12	L2-12-*	-1	YYysdsDKGQGS	BBABAABBBBBB
F	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	87.5	L3	9	L3-9-*	-1	MIWPSNAWV	BBBABBBBB
F	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	87.5	L4	8	L4-8-1	10	KdaSDNTG	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022