PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6IEC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	100.0	H1	13	H1-13-*	-1	AASGFTFSDYYMS	BBBLBALAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	80.0	H2	10	H2-10-*	-1	YISPGGSTIY	BBBAALBLBB
C	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	50.0	H3	12	H3-12-*	-1	ASSADVYNWFDP	BBALBAABALBB
C	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L1	11	L1-11-3	8	GGNNIGSKSVH	BBBLAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	13	YDDSDRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L3	12	L3-12-*	-1	QVWDSSSDHlYV
D	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	16	NSGNTA	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	100.0	H1	13	H1-13-*	-1	AASGFTFSDYYMS	BBBLBALAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	80.0	H2	10	H2-10-*	-1	YISPGGSTIY	BBBAALBLBB
F	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	50.0	H3	12	H3-12-*	-1	ASSADVYNWFDP	BBALBAABALBB
F	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L1	11	L1-11-3	8	GGNNIGSKSVH	BBBLAAABBBB
G	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	12	YDDSDRPS	BLLABBBB
G	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L3	12	L3-12-*	-1	QVWDSSSDHlYV
G	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	16	NSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	100.0	H1	13	H1-13-*	-1	AASGFTFSDYYMS	BBBLBALAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	80.0	H2	10	H2-10-*	-1	YISPGGSTIY	BBBAALBLBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	50.0	H3	12	H3-12-*	-1	ASSADVYNWFDP	BBALBAABALBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	100.0	H1	13	H1-13-*	-1	AASGFTFSDYYMS	BBBLBALAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	80.0	H2	10	H2-10-*	-1	YISPGGSTIY	BBBAALBLBB
J	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	50.0	H3	12	H3-12-*	-1	ASSADVYNWFDP	BBALBAABALBB
J	heavy	Homo.sapiens	Hu_IGHV3-11*01	98.6	Hu_IGHV3-11*01	100.0	H4	8	H4-8-1	13	RDNAKNSL	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L1	11	L1-11-3	9	GGNNIGSKSVH	BBBLAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	13	YDDSDRPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L3	12	L3-12-*	-1	QVWDSSSDHlYV
K	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	15	NSGNTA	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L1	11	L1-11-3	9	GGNNIGSKSVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	13	YDDSDRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L3	12	L3-12-*	-1	QVWDSSSDHlYV
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	98.5	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	15	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022