PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6ID4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-46*01	98.6	Hu_IGHV1-46*01	92.3	H1	13	H1-13-1	8	KASGYTFTGYYMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-46*01	98.6	Hu_IGHV1-46*01	60.0	H2	10	H2-10-1	13	WINPNSGGTS	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-46*01	98.6	Hu_IGHV1-46*01	100.0	H3	14	H3-14-*	-1	ARVTTVIAGPVFDY	BBBBABBAABABAB
C	heavy	Homo.sapiens	Hu_IGHV1-46*01	98.6	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	8	RDTSTSTV	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	85.7	L1	14	L1-14-*	-1	TLRSgINVGPYNIY	BBBAABBAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	83.3	L2	12	L2-12-*	-1	RYKsdpdKHQGS	BBABAABBBBBA
D	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	62.5	L3	9	L3-9-1	10	MIWHNNAWV	BBBBLLBBB
D	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	100.0	L4	8	L4-8-1	8	KdaSANAG	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	98.6	Hu_IGHV1-46*01	92.3	H1	13	H1-13-1	8	KASGYTFTGYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	98.6	Hu_IGHV1-46*01	60.0	H2	10	H2-10-1	13	WINPNSGGTS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	98.6	Hu_IGHV1-46*01	100.0	H3	14	H3-14-*	-1	ARVTTVIAGPVFDY	BBBBABBAABABAB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	98.6	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	8	RDTSTSTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	85.7	L1	14	L1-14-*	-1	TLRSgINVGPYNIY	BBBBLBBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	83.3	L2	12	L2-12-*	-1	RYKsdpdKHQGS	BBABAABBBBBA
L	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	62.5	L3	9	L3-9-1	12	MIWHNNAWV	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	100.0	L4	8	L4-8-1	7	KdaSANAG	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022