PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6IAP

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Synthetic.construct	Hu_IGKV1-NL1*01	97.1	Mo_IGKV12-46*01	100.0	L1	11	L1-11-*	-1	RASENIYSNLA	BBABBBBLBBB
D	kappa	Synthetic.construct	Hu_IGKV1-NL1*01	97.1	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	10	YAATNLAD	BLEABBBB
D	kappa	Synthetic.construct	Hu_IGKV1-NL1*01	97.1	Hu_IGKV1-NL1*01	42.9	L3	9	L3-9-cis7-1	6	QHFWGTPRT	BBAABBbBB
D	kappa	Synthetic.construct	Hu_IGKV1-NL1*01	97.1	Hu_IGKV1-NL1*01	100.0	L4	6	L4-6-*	-1	GSGTDY	EAEEBB
E	heavy	Synthetic.construct	Hu_IGHV1-69*17	93.2	Mo_IGHV1-4*02	92.3	H1	13	H1-13-1	14	KASGYTFTSFTMH	BBBLBBAAABBBB
E	heavy	Synthetic.construct	Hu_IGHV1-69*17	93.2	Mo_IGHV1-4*02	100.0	H2	10	H2-10-1	9	YINPSSGYTE	BBBAAALBBB
E	heavy	Synthetic.construct	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	50.0	H3	10	H3-10-*	-1	VRGSSRGFDY	BBBBAAEBAB
E	heavy	Synthetic.construct	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	11	ADKSTSTA	BBAAALBB
H	heavy	Synthetic.construct	Hu_IGHV1-69*17	91.8	Mo_IGHV1-76*01	84.6	H1	13	H1-13-1	11	KASGYTFSDYVIN	BBBLBBAAABBBB
H	heavy	Synthetic.construct	Hu_IGHV1-69*17	91.8	Mo_IGHV1-76*01	70.0	H2	10	H2-10-1	12	EIYPGSGTNY	BBBAAALBBB
H	heavy	Synthetic.construct	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	100.0	H3	13	H3-13-*	-1	ARRGRYGLYAMDY	BBAAABAALBBAB
H	heavy	Synthetic.construct	Hu_IGHV1-69*17	91.8	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	12	ADKSTSTA	BBAAALBB
L	kappa	Synthetic.construct	Hu_IGKV1-33*01	98.6	Mo_IGKV10-94*03	100.0	L1	11	L1-11-1	9	RASQDISNYLN	BBABBAEABBB
L	kappa	Synthetic.construct	Hu_IGKV1-33*01	98.6	Mo_IGKV10-94*03	100.0	L2	8	L2-8-1	11	YYTSRLHS	BLEABBBB
L	kappa	Synthetic.construct	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	42.9	L3	9	L3-9-cis7-1	5	QQGNTRPWT	BBAABBbBB
L	kappa	Synthetic.construct	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	13	GSGTDF	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022