PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6I07

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	78.1	Hu_IGHV7-4-1*02	84.6	H1	13	H1-13-1	10	KASGYTFTNYGMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	78.1	Hu_IGHV7-4-1*02	70.0	H2	10	H2-10-1	14	WINTYTGEST	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	78.1	Hu_IGHV7-4-1*02	100.0	H3	9	H3-9-*	-1	ARFAIKGDY	BBBBBLEBB
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	78.1	Hu_IGHV7-4-1*02	87.5	H4	8	H4-8-1	7	LDTSASTA	BBAAALBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	62.5	L1	16	L1-16-1	9	RSTKSLlhsdgITYLY	BBABBABBAALBBBBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	62.5	L2	8	L2-8-1	6	YQLSNLAS	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	42.9	L3	9	L3-9-cis7-1	10	AQNLEIPRT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L4	6	L4-6-3	11	GSGTDF	EBAABB
B	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	78.1	Hu_IGHV7-4-1*02	84.6	H1	13	H1-13-1	13	KASGYTFTNYGMN	BBBLEBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	78.1	Hu_IGHV7-4-1*02	70.0	H2	10	H2-10-1	16	WINTYTGEST	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	78.1	Hu_IGHV7-4-1*02	100.0	H3	9	H3-9-*	-1	ARFAIKGDY	BBBBBLEBB
B	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	78.1	Hu_IGHV7-4-1*02	87.5	H4	8	H4-8-1	14	LDTSASTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	62.5	L1	16	L1-16-1	21	RSTKSLlhsdgITYLY	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	62.5	L2	8	L2-8-1	18	YQLSNLAS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	42.9	L3	9	L3-9-cis7-1	20	AQNLEIPRT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L4	6	L4-6-3	25	GSGTDF	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022