PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6HKG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.2	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	7	AASGFTFSSYGMA	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.2	Hu_IGHV3-23*01	60.0	H2	10	H2-10-2	6	FISATGLSTY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.2	Hu_IGHV3-23*01	50.0	H3	15	H3-15-*	-1	ARMRRTMIaFGGNDF
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.2	Hu_IGHV3-23*01	75.0	H4	8	H4-8-1	17	RDTTKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	72.7	L1	11	L1-11-1	6	RASQSVNTNVA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	100.0	L2	8	L2-8-1	6	YGASTRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	85.7	L3	10	L3-10-cis78-1	7	QQYSNWPpIT	BBAABBbbBB
B	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	4	GSGTEF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.2	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	14	AASGFTFSSYGMA	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.2	Hu_IGHV3-23*01	60.0	H2	10	H2-10-2	7	FISATGLSTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.2	Hu_IGHV3-23*01	50.0	H3	15	H3-15-*	-1	ARMRRTMIaFGGNDF
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.2	Hu_IGHV3-23*01	75.0	H4	8	H4-8-1	10	RDTTKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	72.7	L1	11	L1-11-1	4	RASQSVNTNVA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	100.0	L2	8	L2-8-1	5	YGASTRAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	85.7	L3	10	L3-10-cis78-1	8	QQYSNWPpIT	BBAABBbbBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	95.7	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	5	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022