PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6H3U

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-2*02	98.6	Mo_IGHV3-2*02	92.9	H1	14	H1-14-1	14	TVTGYSITsDSAWN	BBBLBBAAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	98.6	Mo_IGHV3-2*02	100.0	H2	9	H2-9-1	7	YISYSGSTS	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	98.6	Mo_IGHV3-2*02	50.0	H3	15	H3-15-*	-1	TRWGDgYYLYWYFDV
H	heavy	Mus.musculus	Mo_IGHV3-2*02	98.6	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	14	RDTSKNQF	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV3-2*02	98.6	Mo_IGHV3-2*02	92.9	H1	14	H1-14-1	15	TVTGYSITsDSAWN	BBBLBBAAABEBBB
I	heavy	Mus.musculus	Mo_IGHV3-2*02	98.6	Mo_IGHV3-2*02	100.0	H2	9	H2-9-1	7	YISYSGSTS	BBBAALBBB
I	heavy	Mus.musculus	Mo_IGHV3-2*02	98.6	Mo_IGHV3-2*02	50.0	H3	15	H3-15-*	-1	TRWGDgYYLYWYFDV
I	heavy	Mus.musculus	Mo_IGHV3-2*02	98.6	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	14	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	100.0	Mo_IGKV10-94*01	90.9	L1	11	L1-11-2	14	SASQGISYYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	100.0	Mo_IGKV10-94*01	100.0	L2	8	L2-8-1	18	YYTSSLHS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	100.0	Mo_IGKV10-94*01	100.0	L3	9	L3-9-cis7-1	14	QQYSKLPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-94*01	100.0	Mo_IGKV10-94*01	100.0	L4	6	L4-6-1	11	GSGTDY	EBEABB
M	kappa	Mus.musculus	Mo_IGKV10-94*01	100.0	Mo_IGKV10-94*01	90.9	L1	11	L1-11-2	14	SASQGISYYLN	BBABBALLBBB
M	kappa	Mus.musculus	Mo_IGKV10-94*01	100.0	Mo_IGKV10-94*01	100.0	L2	8	L2-8-1	18	YYTSSLHS	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV10-94*01	100.0	Mo_IGKV10-94*01	100.0	L3	9	L3-9-cis7-1	13	QQYSKLPWT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV10-94*01	100.0	Mo_IGKV10-94*01	100.0	L4	6	L4-6-1	11	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022