PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6GV1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-6-4*01	97.3	Mo_IGHV2-6-4*01	69.2	H1	13	H1-13-*	-1	TVSGFSFSIYGLH	BBBEABAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-4*01	97.3	Mo_IGHV2-6-4*01	88.9	H2	9	H2-9-*	-1	MIWGGGRTD	BBALALBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-4*01	97.3	Mo_IGHV2-6-4*01	100.0	H3	11	H3-11-*	-1	ARNSGYGNLAY	BBBBABEBLAB
H	heavy	Mus.musculus	Mo_IGHV2-6-4*01	97.3	Mo_IGHV2-6-4*01	100.0	H4	8	H4-8-1	14	KDNSKSQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	90.9	L1	11	L1-11-1	13	RASQDIGYSLN	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	87.5	L2	8	L2-8-1	12	YATSNLDS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L3	9	L3-9-cis7-1	5	LQYASSPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L4	6	L4-6-2	14	RSGSDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022