PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6GLX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Lama.glama	Al_IGHV4S1*01	98.6	Al_IGHV4S1*01	100.0	H1	15	H1-15-*	-1	TVSGGSIttSYYAWS	BAALLBBLBALBLBB
C	heavy	Lama.glama	Al_IGHV4S1*01	98.6	Al_IGHV4S1*01	88.9	H2	9	H2-9-*	-1	VIASDGSTY	BBBAABABB
C	heavy	Lama.glama	Al_IGHV4S1*01	98.6	Al_IGHV4S1*01	50.0	H3	17	H3-17-*	-1	AlyiRGSSWSGWSAYDY
C	heavy	Lama.glama	Al_IGHV4S1*01	98.6	Al_IGHV4S1*01	100.0	H4	8	H4-8-1	9	RDTSKNQF	BBAAALBB
D	lambda	Lama.glama	Al_IGLV3-5*01	93.8	Al_IGLV3-5*01	90.9	L1	11	L1-11-*	-1	QGGNFGYYYGS	BLBBBEABBBB
D	lambda	Lama.glama	Al_IGLV3-5*01	93.8	Al_IGLV3-5*01	87.5	L2	8	L2-8-1	17	YKDSERPS	BLLABBBB
D	lambda	Lama.glama	Al_IGLV3-5*01	93.8	Al_IGLV3-5*01	42.9	L3	10	L3-10-*	-1	QSADSSDNPV	BBBABAABBB
D	lambda	Lama.glama	Al_IGLV3-5*01	93.8	Al_IGLV3-5*01	83.3	L4	6	L4-6-2	14	SSGGTA	BBEABB
H	heavy	Lama.glama	Al_IGHV4S1*01	98.6	Al_IGHV4S1*01	100.0	H1	15	H1-15-*	-1	TVSGgsittsyYAWS
H	heavy	Lama.glama	Al_IGHV4S1*01	98.6	Al_IGHV4S1*01	88.9	H2	9	H2-9-*	-1	VIASDGSTY	BBBAABBBB
H	heavy	Lama.glama	Al_IGHV4S1*01	98.6	Al_IGHV4S1*01	50.0	H3	17	H3-17-*	-1	AlyirgsSWSGWSAYDY
H	heavy	Lama.glama	Al_IGHV4S1*01	98.6	Al_IGHV4S1*01	100.0	H4	8	H4-8-1	9	RDTSKNQF	BBAAALBB
L	lambda	Lama.glama	Al_IGLV3-5*01	93.8	Al_IGLV3-5*01	90.9	L1	11	L1-11-*	-1	QGGNFGYYYGS	BLBBBEABBBB
L	lambda	Lama.glama	Al_IGLV3-5*01	93.8	Al_IGLV3-5*01	87.5	L2	8	L2-8-1	18	YKDSERPS	BLLABBBB
L	lambda	Lama.glama	Al_IGLV3-5*01	93.8	Al_IGLV3-5*01	42.9	L3	10	L3-10-*	-1	QSADSSDNPV	BBBABAABBB
L	lambda	Lama.glama	Al_IGLV3-5*01	93.8	Al_IGLV3-5*01	83.3	L4	6	L4-6-2	13	SSGGTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022