PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6GLW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Lama.glama	Al_IGHV3-1*01	98.6	Al_IGHV3-1*01	100.0	H1	13	H1-13-1	8	AASGFTFDDYAMS	BBBLBBAAABBBB
C	heavy	Lama.glama	Al_IGHV3-1*01	98.6	Al_IGHV3-1*01	90.0	H2	10	H2-10-2	5	GISWNGGSTY	BBBAALABBB
C	heavy	Lama.glama	Al_IGHV3-1*01	98.6	Al_IGHV3-1*01	100.0	H3	16	H3-16-*	-1	AKDRNLGYrlGYPYDY
C	heavy	Lama.glama	Al_IGHV3-1*01	98.6	Al_IGHV3-1*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
D	lambda	Lama.glama	Al_IGLV2-3*01	91.2	Al_IGLV2-3*01	100.0	L1	14	L1-14-2	17	AGTSSDVGYgNYVS	BBBAAAAAAEBABB
D	lambda	Lama.glama	Al_IGLV2-3*01	91.2	Al_IGLV2-3*01	87.5	L2	8	L2-8-1	4	YEVNKRAS	BLEABBBB
D	lambda	Lama.glama	Al_IGLV2-3*01	91.2	Al_IGLV2-3*01	100.0	L3	10	L3-10-*	-1	ASYRSSNNAV	BBBBBbLBBB
D	lambda	Lama.glama	Al_IGLV2-3*01	91.2	Al_IGLV2-3*01	100.0	L4	6	L4-6-2	7	KSGNTA	BBEABB
H	heavy	Lama.glama	Al_IGHV3-1*01	98.6	Al_IGHV3-1*01	100.0	H1	13	H1-13-1	9	AASGFTFDDYAMS	BBBLBBAAABBBB
H	heavy	Lama.glama	Al_IGHV3-1*01	98.6	Al_IGHV3-1*01	90.0	H2	10	H2-10-2	5	GISWNGGSTY	BBBAALABBB
H	heavy	Lama.glama	Al_IGHV3-1*01	98.6	Al_IGHV3-1*01	100.0	H3	16	H3-16-*	-1	AKDRNLGYrlGYPYDY
H	heavy	Lama.glama	Al_IGHV3-1*01	98.6	Al_IGHV3-1*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
L	lambda	Lama.glama	Al_IGLV2-3*01	91.2	Al_IGLV2-3*01	100.0	L1	14	L1-14-2	17	AGTSSDVGYgNYVS	BBBAAAAAAEBABB
L	lambda	Lama.glama	Al_IGLV2-3*01	91.2	Al_IGLV2-3*01	87.5	L2	8	L2-8-1	4	YEVNKRAS	BLEABBBB
L	lambda	Lama.glama	Al_IGLV2-3*01	91.2	Al_IGLV2-3*01	100.0	L3	10	L3-10-*	-1	ASYRSSNNAV	BBBBBbLBBB
L	lambda	Lama.glama	Al_IGLV2-3*01	91.2	Al_IGLV2-3*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022