PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6GKU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Lama.glama	La_IGHV1S6*01	94.5	La_IGHV1S6*01	92.3	H1	13	H1-13-1	9	AASGFTFSSYAMS	BBBLBBAAABBBB
H	heavy	Lama.glama	La_IGHV1S6*01	94.5	La_IGHV1S6*01	30.0	H2	10	H2-10-2	8	AINSGGGSTS	BBBAALABBB
H	heavy	Lama.glama	La_IGHV1S6*01	94.5	La_IGHV1S6*01	50.0	H3	14	H3-14-*	-1	ATPGDRLWYYRYDY	BBaLBAAALLBBAB
H	heavy	Lama.glama	La_IGHV1S6*01	94.5	La_IGHV1S6*01	87.5	H4	8	H4-8-1	4	RDNAKNTL	BBAAALBB
L	lambda	Lama.glama	La_IGLV2-7*01	89.6	La_IGLV2-7*01	92.9	L1	14	L1-14-2	12	AGTSSDIGYgNYVS	BBBAAAAAABBABB
L	lambda	Lama.glama	La_IGLV2-7*01	89.6	La_IGLV2-7*01	75.0	L2	8	L2-8-1	7	YKVSRRAS	BLLABBBB
L	lambda	Lama.glama	La_IGLV2-7*01	89.6	La_IGLV2-7*01	0.0	L3	10	L3-10-*	-1	ASYRYRNNVV	BBBBBLAEBB
L	lambda	Lama.glama	La_IGLV2-7*01	89.6	La_IGLV2-7*01	100.0	L4	6	L4-6-2	7	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022